Tags : Browse Projects

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MedSavant

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  Analyzed about 20 hours ago

MedSavant is a search engine for genetic variants.

128K lines of code

0 current contributors

about 8 years since last commit

2 users on Open Hub

Inactive
0.0
 
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JBrowse

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  Analyzed about 22 hours ago

A modern AJAX genome browser.

58.1K lines of code

0 current contributors

over 1 year since last commit

1 users on Open Hub

Very Low Activity
5.0
 
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glbase

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  No analysis available

glbase is a flexible and multifunctional toolkit allowing the user to perform many common analyses on ChIP-seq, microarray and RNA-seq data It's particularly useful for intersecting any data that can be expressed as a CSV file. Examples are RNA-seq microarray data, gene lists, Chip-seq location ... [More] lists and large next-generation sequencing data. See the publication here: http://www.cellregenerationjournal.com/content/3/1/1/abstract [Less]

0 lines of code

0 current contributors

0 since last commit

1 users on Open Hub

Activity Not Available
0.0
 
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Mostly written in language not available
Licenses: mit

Gene Crawler

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  Analyzed about 10 hours ago

Tool for extracting dna sequences from a given gene symbol and searching these regions for specified patterns

623 lines of code

0 current contributors

about 10 years since last commit

1 users on Open Hub

Inactive
0.0
 
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SnpEff

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  Analyzed about 23 hours ago

SnpEff is a variant annotation and effect prediction tool. It annotates and predicts the effects of variants on genes (such as amino acid changes).

145K lines of code

2 current contributors

about 2 months since last commit

1 users on Open Hub

Low Activity
4.0
   
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GWASpi

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  Analyzed about 2 hours ago

A tool to perform Genome-Wide Association Studies written in Java. It is primarily meant to be used on desktop machines through its GUI (alternatively via scripts).

64K lines of code

0 current contributors

almost 9 years since last commit

0 users on Open Hub

Inactive
0.0
 
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MiModD

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  Analyzed about 11 hours ago

MiModD is an integrated solution for mapping-by-sequencing analysis of whole-genome sequencing (WGS) data from laboratory model organisms. It enables geneticists to identify the genetic mutations present in an organism starting from just raw WGS read data and a reference genome without the help of a ... [More] trained bioinformatician. Its linkage analysis engine NacreousMap represents a further development of and can be used as a drop-in replacement for CloudMap. [Less]

16.8K lines of code

0 current contributors

about 3 years since last commit

0 users on Open Hub

Inactive
0.0
 
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GEMINI_genome_mining

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  Analyzed about 10 hours ago

a lightweight db framework for exploring genetic variation

27.6K lines of code

3 current contributors

about 4 years since last commit

0 users on Open Hub

Inactive
0.0
 
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Licenses: No declared licenses

KEGG4J

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  Analyzed about 6 hours ago

Java Utils regarding the KEGG API

2.93K lines of code

0 current contributors

about 3 years since last commit

0 users on Open Hub

Inactive
0.0
 
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HMDB4J

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  Analyzed about 1 month ago

Java utils to parse and handle the http://www.hmdb.ca/downloads files

2.12K lines of code

0 current contributors

about 3 years since last commit

0 users on Open Hub

Activity Not Available
0.0
 
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